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Empower Tip: Review Window and the Processing Method

Empower Tip: Review Window and the Processing Method

Tip #47: Deriving Channels in Empower

Tip #47: Deriving Channels in Empower

The term Deriving a Channel can mean several things. Some examples are:

Performing a mathematical operation on a channel such as smoothing.

Mathematically combining two or more channels to obtain a total response for analytes that live in different channels.

Extracting a 2D channel from a 3D channel such as extracting a single wavelength from a wavelength range collected with a Photo Diode Array detector.

And there are many more applications. For this tip let’s explore a simple example of smoothing a channel of data collected with a UV detector.

STEP 1

STEP 1

We start by bringing an injection into Review. The method set has been opened and applied. Note the signal-to-noise ratio for the relatively small peak at 5.625 minutes is 139/1 and the height is 1767 microvolts.

STEP 2

STEP 2

Zooming in on the baseline between 8 and 12 minutes we see some short-term noise in the baseline. Our goal is to smooth the baseline thus reducing the noise in this region.

STEP 3

STEP 3

In the method set window, we see Derived Channels under the Method Set tree. Right-click on Derived Channels and select New, Derived Channel.

STEP 4

STEP 4

On the First (Only) Channel tab select the channel of data you want to work with from the drop-down list.

STEP 5

STEP 5

On the Filter/Offset tab select the amount of smoothing from the drop down list (the higher the number the more smoothing is applied) along with the type of smoothing.

STEP 6

STEP 6

Click OK and when prompted enter a name for the Derived Channel.

STEP 7

STEP 7

Add the Processing Method in the Processing Method field.

STEP 8

STEP 8

Return to the main window and after applying the method set note the signal-to-noise ratio for the same peak is now 172/1 due to the reduction in noise and the height is now 1757 microvolts. (Smoothing smoothes all data points across the chromatogram hence the slight reduction in peak height.)

STEP 9

STEP 9

Finally, we see a zoomed view of both chromatograms between 8 and 12 minutes, and clearly the smoothed chromatogram has less noise than the original.

It’s that easy!

Final Notes

1. Savitzky-Golay smoothing averages data points. For more detailed information Google a book called Chromatographic Integration Methods by Norman Allen Dyson. There is a good section on filtering and smoothing chromatographic signals.

2. This procedure can be followed using the QuickStart or Pro interface.




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